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Species belonging to selected taxon:

Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000814
species: Gossypium raimondii
miRNA family: MIR413
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGTTTCTCTAGTTCTGCAC

miRNA*
TTAGGACTAGGAAACAGAAA

mismatches: 4
bulges: 1

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pre-miRNA
TAATTATGTTTCCATCCTAATGTTTGGTTACGCCAGCCGGTCTACGGTTTAATGCATTTAGACATCTGATGTTGGTTTCTCTAGTTCTGCACTTATTCAT
TTATAGACAGGAAATTTGTATCTTTGTGTTTAGGACTAGGAAACAGAAAGGTGTTCAAAAGTTCCATTTGGCCTTGGCTGAGGACTTACTTTTAGCACAG
TGAATCAAGATCTGAAA


dot-bracket secondary structure
............((((...((((((((....((.(((((.....)))))....))..))))))))..))))...(((((.(((((((((.((.....((.
......((((.....)))).....)).)).))))))))))))))......(((((.((((((....((((((....)))))).....)))))))))))..
....(((.....)))..



SIMILARITIES
miRBase no hits

PMRD ghr-miR413: 2e-32

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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